Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
KXB80391.1Peptidase C1-like family protein; KEGG: cpi:Cpin_0714 2.7e-41 peptidase C1B bleomycin hydrolase; K01372 bleomycin hydrolase; Psort location: Cytoplasmic, score: 8.96. (348 aa)    
Predicted Functional Partners:
rnr
Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.
   
   0.717
KXB80403.1
Hypothetical protein; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides.
  
     0.612
KXB80274.1
Putative NAD(+) diphosphatase; KEGG: pmz:HMPREF0659_A5588 5.2e-100 hydrolase, NUDIX family; K03426 NAD+ diphosphatase; Psort location: Cytoplasmic, score: 8.96.
    
   0.603
KXB75716.1
Hydrolase, NUDIX family; KEGG: pmz:HMPREF0659_A5133 9.3e-55 mutator MutT protein; Psort location: Cytoplasmic, score: 8.96.
    
   0.603
KXB78799.1
Hypothetical protein.
  
     0.552
KXB78800.1
TonB-dependent receptor; Psort location: OuterMembrane, score: 9.92.
  
     0.514
KXB80393.1
NAD dependent epimerase/dehydratase family protein; KEGG: bfs:BF4355 1.5e-102 UDP-glucose 4-epimerase K01784; Psort location: Cytoplasmic, score: 9.97.
       0.445
KXB80394.1
PAP2 family protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.405
KXB74250.1
KEGG: pmz:HMPREF0659_A6994 0. peptidase, S9A/B/C family, catalytic domain protein.
  
     0.400
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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