STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB80422.1KEGG: pmz:HMPREF0659_A6333 0. peptidase M16 inactive domain protein K07263; Psort location: Cytoplasmic, score: 8.96. (948 aa)    
Predicted Functional Partners:
KXB78018.1
Respiratory-chain NADH dehydrogenase, subunit; KEGG: pdn:HMPREF9137_1116 8.1e-246 hypothetical protein; K13378 NADH-quinone oxidoreductase subunit C/D; Psort location: Cytoplasmic, score: 9.12.
   
 
 0.995
KXB78030.1
Pyruvate synthase; KEGG: pdn:HMPREF9137_1524 0. nifJ; pyruvate synthase K03737; Psort location: Cytoplasmic, score: 8.96.
  
   0.768
KXB79160.1
KEGG: pmz:HMPREF0659_A5967 7.2e-32 4Fe-4S binding domain protein; K00176 2-oxoglutarate ferredoxin oxidoreductase subunit delta.
  
   0.752
KXB78020.1
KEGG: pdn:HMPREF9137_1118 7.4e-85 4Fe-4S binding protein; K00338 NADH-quinone oxidoreductase subunit I; Psort location: Cytoplasmic, score: 9.12.
  
   0.752
nuoB
NADH-quinone oxidoreductase, B subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
   
 
 0.721
KXB79616.1
Deoxynucleoside kinase; KEGG: pdn:HMPREF9137_1215 9.8e-99 dck; deoxyadenosine/deoxycytidine kinase; Psort location: Cytoplasmic, score: 8.96.
   
   0.706
KXB79617.1
Deoxynucleoside kinase; KEGG: pdn:HMPREF9137_1216 3.3e-91 deoxynucleoside kinase; Psort location: Cytoplasmic, score: 8.96.
   
   0.706
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
   0.700
acpP-2
Putative acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
   
   0.700
KXB78087.1
KEGG: axy:AXYL_02359 1.2e-15 acyl carrier domain-containing protein K02078; Psort location: Cytoplasmic, score: 8.96.
   
   0.700
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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