STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cysScysteine--tRNA ligase; KEGG: pmz:HMPREF0659_A6358 2.3e-239 cysS; cysteine--tRNA ligase K01883; Psort location: Cytoplasmic, score: 9.97; Belongs to the class-I aminoacyl-tRNA synthetase family. (495 aa)    
Predicted Functional Partners:
KXB78750.1
Cysteine synthase A; KEGG: pmz:HMPREF0659_A6111 6.0e-131 cysK; cysteine synthase A K01738; Psort location: Cytoplasmic, score: 9.26; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
 0.900
KXB77499.1
KEGG: pdn:HMPREF9137_1236 4.3e-121 putative serine O-acetyltransferase; K00640 serine O-acetyltransferase; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.894
KXB80428.1
RNA methyltransferase, TrmH family; KEGG: ccm:Ccan_04200 2.8e-46 23S rRNA Gm2251 2'-O-methyltransferase; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.852
KXB74262.1
Bacterial transferase hexapeptide repeat protein; KEGG: gka:GK3309 2.9e-19 serine acetyltransferase K00640; Psort location: Cytoplasmic, score: 9.26.
  
 
 0.808
leuS
leucine--tRNA ligase; KEGG: pmz:HMPREF0659_A5028 0. leuS; leucine--tRNA ligase K01869; Psort location: Cytoplasmic, score: 9.97; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 
 0.765
metG
methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
 
  
 0.702
thrS
threonine--tRNA ligase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).
 
  
 0.690
hisS
histidine--tRNA ligase; KEGG: pmz:HMPREF0659_A5775 1.8e-200 hisS; histidine--tRNA ligase K01892; Psort location: Cytoplasmic, score: 10.00.
  
  
 0.675
argS
arginine--tRNA ligase; KEGG: pmz:HMPREF0659_A6251 1.7e-282 argS; arginine--tRNA ligase K01887; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.669
KXB80427.1
Fe-S metabolism associated domain protein; KEGG: vvu:VV1_1803 9.3e-23 csdE; cysteine desulfurase K02426; Psort location: Cytoplasmic, score: 9.26.
       0.651
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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