Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KXB80432.1Dihydrodipicolinate reductase; KEGG: pdn:HMPREF9137_0605 5.5e-112 dapB; dihydrodipicolinate reductase K00215; Psort location: Cytoplasmic, score: 9.97; Belongs to the DapB family. (251 aa)    
Predicted Functional Partners:
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
 
 
 0.987
KXB78128.1
Putative aspartate kinase III; KEGG: pdn:HMPREF9137_1034 2.4e-191 amino acid kinase family; K00928 aspartate kinase; Psort location: Cytoplasmic, score: 8.96; Belongs to the aspartokinase family.
 
 
 0.776
KXB74229.1
HDIG domain protein; KEGG: bsa:Bacsa_2724 2.2e-179 polynucleotide adenylyltransferase/metal dependent phosphohydrolase; Psort location: Cytoplasmic, score: 9.97; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
  
  
 0.774
KXB77787.1
KEGG: pmz:HMPREF0659_A5894 1.4e-124 pyridoxal-dependent decarboxylase, pyridoxal binding domain protein; K01586 diaminopimelate decarboxylase; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.767
KXB80431.1
Signal peptidase I; KEGG: pdn:HMPREF9137_0606 7.2e-222 lepB; signal peptidase I K03100; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the peptidase S26 family.
 
    0.729
KXB80430.1
WbqC-like protein; KEGG: fna:OOM_0806 3.8e-08 cysteine dioxygenase; Psort location: Cytoplasmic, score: 8.96.
 
   
 0.676
KXB77048.1
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
 
 
 0.602
asd
Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
 
  
 0.578
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
   
  
 0.555
KXB80433.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.523
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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