STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB80433.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (432 aa)    
Predicted Functional Partners:
KXB80434.1
acyl-CoA thioester hydrolase, YbgC/YbaW family; KEGG: pdn:HMPREF9137_0653 2.6e-59 acyl-CoA thioester hydrolase; K07107 acyl-CoA thioester hydrolase; Psort location: Cytoplasmic, score: 8.96.
       0.781
KXB80435.1
DNA protecting protein DprA; KEGG: ccm:Ccan_01460 9.4e-62 protein smf K04096; Psort location: Cytoplasmic, score: 8.96.
 
     0.777
KXB80430.1
WbqC-like protein; KEGG: fna:OOM_0806 3.8e-08 cysteine dioxygenase; Psort location: Cytoplasmic, score: 8.96.
 
     0.742
KXB74293.1
Outer membrane protein, OMP85 family.
  
     0.705
rnpA
Putative ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
  
     0.695
KXB80142.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.677
KXB79960.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.674
KXB74244.1
Type I restriction enzyme HsdR protein; KEGG: nth:Nther_0809 3.8e-05 LexA repressor; Psort location: Cytoplasmic, score: 8.96.
 
     0.644
KXB80146.1
Hypothetical protein.
  
     0.642
KXB80431.1
Signal peptidase I; KEGG: pdn:HMPREF9137_0606 7.2e-222 lepB; signal peptidase I K03100; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the peptidase S26 family.
 
     0.639
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.