STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB80436.1KEGG: pdn:HMPREF9137_0704 1.0e-73 phosphodiesterase family protein K07095; Psort location: Cytoplasmic, score: 8.96. (179 aa)    
Predicted Functional Partners:
KXB80382.1
Non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.
  
  
 0.723
KXB79130.1
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
   
 
 0.678
KXB78226.1
Hypothetical protein; KEGG: hpk:Hprae_1186 2.0e-05 L-serine ammonia-lyase K01752; Psort location: Cytoplasmic, score: 9.97; Belongs to the UPF0597 family.
  
     0.568
KXB80435.1
DNA protecting protein DprA; KEGG: ccm:Ccan_01460 9.4e-62 protein smf K04096; Psort location: Cytoplasmic, score: 8.96.
       0.539
KXB80434.1
acyl-CoA thioester hydrolase, YbgC/YbaW family; KEGG: pdn:HMPREF9137_0653 2.6e-59 acyl-CoA thioester hydrolase; K07107 acyl-CoA thioester hydrolase; Psort location: Cytoplasmic, score: 8.96.
       0.497
KXB78156.1
Hypothetical protein; KEGG: apb:SAR116_1299 5.3e-107 endonuclease.
    
 
 0.458
KXB80433.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.415
KXB78739.1
Putative metal-binding protein.
  
     0.403
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.