STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB80092.1Hypothetical protein; KEGG: pkn:PKH_011660 0.0030 mannose-6-phosphate isomerase. (787 aa)    
Predicted Functional Partners:
KXB80093.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.849
KXB80088.1
OmpA family protein; KEGG: hhy:Halhy_4875 0.00037 OmpA/MotB domain-containing protein; K02275 cytochrome c oxidase subunit II; Psort location: OuterMembrane, score: 10.00.
 
   
 0.796
KXB78297.1
Hypothetical protein.
  
    0.779
KXB76234.1
Hypothetical protein.
  
    0.779
KXB74186.1
Hypothetical protein.
  
     0.773
KXB74192.1
Sporulation and cell division repeat protein.
  
     0.773
KXB76000.1
Tetratricopeptide repeat protein.
  
     0.771
KXB74998.1
Hypothetical protein.
  
     0.770
KXB80132.1
TonB-dependent receptor; KEGG: hip:CGSHiEE_01810 2.4e-07 bcp; TonB K03832; Psort location: Periplasmic, score: 9.83.
 
 
 
 0.767
KXB79154.1
Hypothetical protein; KEGG: zga:zobellia_4408 0.0034 thiol-disulfide oxidoreductase.
  
     0.767
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.