STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB80121.1KEGG: pmz:HMPREF0659_A5448 6.5e-102 psd; phosphatidylserine decarboxylase K01613; Psort location: Cytoplasmic, score: 8.96. (235 aa)    
Predicted Functional Partners:
KXB80122.1
KEGG: pmz:HMPREF0659_A5449 6.6e-93 pssA; CDP-diacylglycerol-serine O-phosphatidyltransferase K00998; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
 
 0.994
KXB80123.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.833
KXB80120.1
KEGG: pmz:HMPREF0659_A5447 0. putative DNA polymerase III subunit alpha; K02337 DNA polymerase III subunit alpha; Psort location: Cytoplasmic, score: 9.97.
       0.704
KXB80119.1
Thioredoxin; KEGG: cla:Cla_1412 1.0e-25 trx; thioredoxin K03671; Psort location: Cytoplasmic, score: 9.26; Belongs to the thioredoxin family.
       0.618
menG
Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).
    
 0.490
KXB79121.1
SPFH/Band 7/PHB domain protein; KEGG: reh:H16_A2036 1.1e-53 h16_A2036; membrane protease subunits, stomatin/prohibitin homologs; Psort location: Cytoplasmic, score: 8.96.
    
   0.480
KXB78792.1
KEGG: pmz:HMPREF0659_A5654 1.5e-175 phospholipase D domain protein; Psort location: CytoplasmicMembrane, score: 7.88.
   
 0.479
KXB78058.1
Putative cardiolipin synthetase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.
   
 0.479
KXB78037.1
Transporter, major facilitator family protein; KEGG: gdj:Gdia_1396 2.8e-09 glucose/galactose transporter K12373; Psort location: CytoplasmicMembrane, score: 10.00.
    
  0.442
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
  0.437
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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