STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB80141.1GSCFA family protein; Psort location: Cytoplasmic, score: 8.96. (269 aa)    
Predicted Functional Partners:
KXB80142.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.848
KXB75113.1
Putative phage DNA packaging protein.
  
 0.752
KXB75105.1
Hypothetical protein; KEGG: bqy:MUS_1261 2.1e-09 transglycosylase; Psort location: CytoplasmicMembrane, score: 9.82.
   
   0.655
KXB80419.1
uroporphyrinogen-III synthase; KEGG: pdn:HMPREF9137_0433 2.5e-107 hemD; uroporphyrinogen-III synthase K01719; Psort location: Cytoplasmic, score: 8.96.
 
     0.632
KXB77048.1
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
 
     0.559
KXB79003.1
Hypothetical protein.
  
 
  0.550
KXB77312.1
Hypothetical protein.
  
 
  0.534
KXB78240.1
SusD family protein.
  
 
  0.529
KXB77624.1
Hypothetical protein.
  
 
  0.529
KXB77049.1
Hypothetical protein; KEGG: mct:MCR_0333 5.9e-05 fur; ferric uptake regulation protein Fur K03711; Psort location: Cytoplasmic, score: 8.96; Belongs to the Fur family.
 
    0.523
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.