Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KXB80145.1Outer membrane assembly lipoprotein YfiO. (309 aa)    
Predicted Functional Partners:
KXB78962.1
Outer membrane protein assembly complex, YaeT protein; KEGG: apb:SAR116_0511 3.2e-18 surface antigen D15 K07277; Psort location: OuterMembrane, score: 10.00.
 
 
 0.981
KXB79956.1
Outer membrane insertion signal domain protein; Psort location: OuterMembrane, score: 9.52.
 
 
 
 0.964
KXB74293.1
Outer membrane protein, OMP85 family.
 
 
 0.926
KXB80146.1
Hypothetical protein.
 
 
 
 0.899
KXB74186.1
Hypothetical protein.
  
   0.861
KXB80142.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.839
KXB80152.1
Outer membrane protein, OMP85 family.
 
 
 0.836
KXB75733.1
KEGG: pdn:HMPREF9137_0249 3.3e-194 PPIC-type PPIASE domain-containing protein; K03771 peptidyl-prolyl cis-trans isomerase SurA.
  
 
 
 0.830
KXB80600.1
Hypothetical protein; KEGG: pyo:PY00139 0.00064 erythrocyte membrane protein; K09561 STIP1 homology and U-box containing protein 1; Psort location: OuterMembrane, score: 9.49.
 
 
 
 0.809
KXB78964.1
BNR/Asp-box repeat protein.
  
 
 0.808
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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