STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB80150.1Hypothetical protein; KEGG: ccv:CCV52592_1824 3.7e-07 phosphoglycerate kinase; Psort location: CytoplasmicMembrane, score: 10.00. (469 aa)    
Predicted Functional Partners:
KXB80151.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
 
     0.547
KXB77269.1
RteC protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.497
KXB77264.1
Putative translation elongation factor G; KEGG: bnm:BALAC2494_01437 4.4e-64 Protein-synthesizing GTPase; Psort location: Cytoplasmic, score: 9.97.
  
 
   0.486
KXB77294.1
Hypothetical protein; KEGG: pgn:PGN_0055 3.8e-42 lysozyme; K01185 lysozyme.
  
     0.486
KXB77265.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: zga:zobellia_1342 6.0e-50 two-component system hybrid-sensor histidine kinase/response regulator, receiver domain; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.458
KXB80149.1
ATP-binding cassette protein, ChvD family; KEGG: ccm:Ccan_07020 1.7e-206 ABC transporter ATP-binding protein; Psort location: Cytoplasmic, score: 9.97.
       0.456
KXB80152.1
Outer membrane protein, OMP85 family.
       0.433
KXB74152.1
Hyaluronoglucosaminidase; KEGG: cpe:CPE1279 6.4e-57 nagK; hyaluronidase; K01197 hyaluronoglucosaminidase.
  
     0.419
KXB77289.1
Conjugative transposon TraM protein.
  
     0.411
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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