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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB80152.1Outer membrane protein, OMP85 family. (780 aa)    
Predicted Functional Partners:
KXB80151.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
 
   
 0.967
KXB80145.1
Outer membrane assembly lipoprotein YfiO.
 
 
 0.826
KXB78964.1
BNR/Asp-box repeat protein.
 
 
 0.769
KXB74160.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.733
KXB77480.1
KEGG: pmz:HMPREF0659_A5253 3.0e-200 putative RIP metalloprotease RseP; K11749 regulator of sigma E protease; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.688
KXB77641.1
Hypothetical protein; KEGG: zin:ZICARI_156 0.00066 tilS; putative tRNA(Ile)-lysidine synthetase; K04075 tRNA(Ile)-lysidine synthase; Psort location: OuterMembrane, score: 9.49.
 
   
 0.663
KXB79092.1
Hypothetical protein.
  
     0.660
tsf
Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.
 
  
 0.602
KXB78018.1
Respiratory-chain NADH dehydrogenase, subunit; KEGG: pdn:HMPREF9137_1116 8.1e-246 hypothetical protein; K13378 NADH-quinone oxidoreductase subunit C/D; Psort location: Cytoplasmic, score: 9.12.
  
 
 0.586
KXB75734.1
OstA-like protein.
  
  
 0.584
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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