STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB79956.1Outer membrane insertion signal domain protein; Psort location: OuterMembrane, score: 9.52. (435 aa)    
Predicted Functional Partners:
KXB79957.1
Hypothetical protein.
 
    0.939
KXB79959.1
Hypothetical protein; KEGG: pdn:HMPREF9137_0079 1.2e-299 hypothetical protein; K03770 peptidyl-prolyl cis-trans isomerase D; Psort location: OuterMembrane, score: 9.49.
 
     0.891
KXB79960.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.781
KXB80389.1
Hypothetical protein.
  
    0.771
KXB79955.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.760
KXB79958.1
KEGG: swp:swp_3771 8.9e-34 hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
       0.753
KXB80600.1
Hypothetical protein; KEGG: pyo:PY00139 0.00064 erythrocyte membrane protein; K09561 STIP1 homology and U-box containing protein 1; Psort location: OuterMembrane, score: 9.49.
  
     0.738
KXB80092.1
Hypothetical protein; KEGG: pkn:PKH_011660 0.0030 mannose-6-phosphate isomerase.
  
     0.726
KXB77641.1
Hypothetical protein; KEGG: zin:ZICARI_156 0.00066 tilS; putative tRNA(Ile)-lysidine synthetase; K04075 tRNA(Ile)-lysidine synthase; Psort location: OuterMembrane, score: 9.49.
  
     0.709
KXB79102.1
Tetratricopeptide repeat protein; KEGG: ava:Ava_1552 0.0016 TPR repeat-containing serine/threonine protein kinase K00908.
  
     0.705
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.