STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB79965.1Nicotinamide mononucleotide transporter PnuC; KEGG: hip:CGSHiEE_06685 0.00011 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K03811; Psort location: CytoplasmicMembrane, score: 10.00. (207 aa)    
Predicted Functional Partners:
KXB79966.1
TonB-dependent receptor plug domain protein; KEGG: ccm:Ccan_21620 2.1e-05 putative Metallocarboxypeptidase D; Psort location: OuterMembrane, score: 9.49.
 
  
 0.880
KXB79964.1
KEGG: pmz:HMPREF0659_A6426 7.5e-69 thiamine diphosphokinase K00949.
       0.849
KXB79898.1
Quinolinate synthetase complex, A subunit; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.
  
  
 0.706
KXB79897.1
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
   
  
 0.588
KXB79963.1
Cupin domain protein; KEGG: cco:CCC13826_0495 1.9e-15 5'-nucleotidase SurE.
       0.484
secF
Export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
  
  
 0.408
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.