STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB79972.1Hypothetical protein; KEGG: bba:Bd0024 0.0063 sdhC; cytochrome B subunit K00241; Psort location: CytoplasmicMembrane, score: 10.00. (170 aa)    
Predicted Functional Partners:
KXB79971.1
Transporter, MotA/TolQ/ExbB proton channel family protein; KEGG: pfe:PSF113_4167 1.9e-11 exbB; protein ExbB/TolQ K03561; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.864
KXB79973.1
Hypothetical protein; KEGG: pfe:PSF113_4166 0.0090 exbD; protein ExbD/TolR K03559.
  
    0.856
KXB79974.1
Hypothetical protein.
       0.849
KXB79975.1
KEGG: pfe:PSF113_5648 7.4e-14 asnC family transcriptional regulator K05800; Psort location: Cytoplasmic, score: 9.97.
       0.700
KXB78991.1
Hydrolase, TatD family; KEGG: pmz:HMPREF0659_A7169 4.6e-92 hydrolase, TatD family; K03424 TatD DNase family protein; Psort location: Cytoplasmic, score: 9.97.
       0.405
KXB78992.1
Polyprenyl synthetase; KEGG: pdn:HMPREF9137_2101 1.5e-118 polyprenyl synthetase; K13789 geranylgeranyl diphosphate synthase, type II; Psort location: Cytoplasmic, score: 9.97.
       0.405
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.