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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB79976.1Hypothetical protein; KEGG: bya:BANAU_1965 8.3e-86 yngK; 1,4-alpha-glucan-branching protein; Psort location: Cytoplasmic, score: 8.96. (513 aa)    
Predicted Functional Partners:
rnz
Putative ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family.
       0.515
KXB79978.1
Hypothetical protein.
       0.515
KXB79979.1
MazG family protein; KEGG: pit:PIN17_A1669 1.2e-116 MazG family protein; K02428 dITP/XTP pyrophosphatase; Psort location: Cytoplasmic, score: 8.96.
       0.465
KXB74994.1
KEGG: pdn:HMPREF9137_1209 0. glycosyltransferase group 2 family protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.412
KXB79496.1
Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
       0.405
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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