Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
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rnzPutative ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family. (304 aa)    
Predicted Functional Partners:
KXB79978.1
Hypothetical protein.
       0.820
KXB79979.1
MazG family protein; KEGG: pit:PIN17_A1669 1.2e-116 MazG family protein; K02428 dITP/XTP pyrophosphatase; Psort location: Cytoplasmic, score: 8.96.
     
 0.781
KXB78061.1
KEGG: fin:KQS_02220 3.7e-35 nucA; DNA/RNA non-specific endonuclease precursor K01173; Psort location: Extracellular, score: 9.71.
   
   0.666
KXB75157.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
   
   0.666
KXB74396.1
KEGG: fps:FP2422 5.5e-18 nucA; DNA/RNA non-specific endonuclease K01173.
   
   0.666
valS
valine--tRNA ligase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.
 
  
 0.633
argS
arginine--tRNA ligase; KEGG: pmz:HMPREF0659_A6251 1.7e-282 argS; arginine--tRNA ligase K01887; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.579
KXB79976.1
Hypothetical protein; KEGG: bya:BANAU_1965 8.3e-86 yngK; 1,4-alpha-glucan-branching protein; Psort location: Cytoplasmic, score: 8.96.
       0.515
KXB80838.1
Hsp90 protein; KEGG: eab:ECABU_c05560 3.7e-67 htpG; heat shock protein HtpG K04079; Psort location: Cytoplasmic, score: 9.97.
  
 
   0.472
hisS
histidine--tRNA ligase; KEGG: pmz:HMPREF0659_A5775 1.8e-200 hisS; histidine--tRNA ligase K01892; Psort location: Cytoplasmic, score: 10.00.
   
 
 0.439
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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