STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB79893.1ABC transporter, ATP-binding protein; KEGG: pah:Poras_1381 2.1e-142 xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00. (579 aa)    
Predicted Functional Partners:
KXB79895.1
KEGG: efu:HMPREF0351_12109 2.4e-06 TetR/AcrR family transcriptional regulator; Psort location: Cytoplasmic, score: 8.96.
 
   
 0.897
KXB79894.1
ABC transporter, ATP-binding protein; KEGG: tbe:Trebr_1031 8.2e-134 xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00.
 
    
0.844
KXB79890.1
Hypothetical protein.
 
     0.817
KXB79892.1
Hypothetical protein; KEGG: apb:SAR116_0292 2.0e-39 exporter of the RND superfamily K07003; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.815
KXB79891.1
Hypothetical protein.
 
     0.806
KXB74314.1
Transcriptional regulator, TetR family; Psort location: Cytoplasmic, score: 8.96.
 
   
 0.704
KXB75163.1
Hypothetical protein; KEGG: apb:SAR116_0647 5.1e-22 organic solvents resistance ABC transporter K02066; Psort location: CytoplasmicMembrane, score: 10.00.
  
   0.671
KXB79459.1
Hypothetical protein.
  
  
  0.638
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
    
 
 0.587
KXB77855.1
ABC transporter, ATP-binding protein; KEGG: osp:Odosp_0369 1.2e-45 Xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 7.88.
 
 
 
0.583
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.