Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB79894.1ABC transporter, ATP-binding protein; KEGG: tbe:Trebr_1031 8.2e-134 xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00. (584 aa)    
Predicted Functional Partners:
KXB79893.1
ABC transporter, ATP-binding protein; KEGG: pah:Poras_1381 2.1e-142 xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 
0.969
KXB79895.1
KEGG: efu:HMPREF0351_12109 2.4e-06 TetR/AcrR family transcriptional regulator; Psort location: Cytoplasmic, score: 8.96.
 
   
 0.919
KXB79890.1
Hypothetical protein.
 
     0.759
KXB79892.1
Hypothetical protein; KEGG: apb:SAR116_0292 2.0e-39 exporter of the RND superfamily K07003; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.755
KXB79891.1
Hypothetical protein.
 
   
 0.742
KXB74314.1
Transcriptional regulator, TetR family; Psort location: Cytoplasmic, score: 8.96.
 
   
 0.730
KXB79917.1
ABC transporter, ATP-binding protein; KEGG: tnr:Thena_1393 6.7e-52 xenobiotic-transporting ATPase K11085; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 
0.580
KXB80424.1
KEGG: pmz:HMPREF0659_A6394 1.8e-280 putative Lipid A export ATP-binding/permease protein MsbA; K11085 ATP-binding cassette, subfamily B, bacterial MsbA; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 
0.577
KXB81583.1
KEGG: bqy:MUS_0693 2.3e-28 nodI1; Nod factor export ATP-binding protein I K09687; Psort location: CytoplasmicMembrane, score: 9.82.
  
 
 0.510
KXB79889.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.504
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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