STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB79901.1Starch synthase; KEGG: pru:PRU_0670 1.8e-186 glycogen synthase family protein; Psort location: Cytoplasmic, score: 8.96. (554 aa)    
Predicted Functional Partners:
KXB79902.1
KEGG: pmz:HMPREF0659_A6343 0. glgP; alpha-glucan phosphorylase K00688; Psort location: Cytoplasmic, score: 9.97.
 0.991
KXB79021.1
KEGG: pmz:HMPREF0659_A6687 0. alpha amylase, catalytic domain protein; K00700 1,4-alpha-glucan branching enzyme; Psort location: Cytoplasmic, score: 9.97.
  
 0.882
KXB80814.1
KEGG: pmz:HMPREF0659_A5929 3.8e-184 glycosyl hydrolase, family 57; K07405 alpha-amylase; Psort location: Cytoplasmic, score: 8.96.
 
  
  0.722
KXB80816.1
Putative glycogen debranching enzyme, type; KEGG: ccm:Ccan_04120 1.3e-121 putative 4-alpha-glucanotransferase and amylo-alpha-1,6-glucosidase; Psort location: Cytoplasmic, score: 8.96.
 
 0.717
KXB80815.1
KEGG: pdn:HMPREF9137_1479 2.2e-204 glycosyltransferase group 1 family protein; Psort location: Cytoplasmic, score: 8.96.
  
  
  0.710
KXB79900.1
Hypothetical protein.
       0.698
KXB77796.1
KEGG: bsa:Bacsa_1195 1.0e-158 UDP-galactopyranose mutase K01854; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.586
KXB74251.1
Transporter, major facilitator family protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.528
KXB81973.1
KEGG: pdn:HMPREF9137_1300 1.4e-184 rffG; dTDP-glucose 4,6-dehydratase K01710; Psort location: Cytoplasmic, score: 8.96; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
 
 0.484
KXB79136.1
KEGG: pmz:HMPREF0659_A5961 1.6e-242 ATP-dependent DNA helicase, RecQ family K03654; Psort location: Cytoplasmic, score: 9.97.
    
   0.469
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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