Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB79760.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (390 aa)    
Predicted Functional Partners:
KXB79758.1
Hypothetical protein.
       0.773
KXB79759.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.773
KXB79765.1
KEGG: cba:CLB_2447 2.1e-16 Clp protease; K01358 ATP-dependent Clp protease, protease subunit; Psort location: Cytoplasmic, score: 8.96; Belongs to the peptidase S14 family.
  
    0.706
KXB79761.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.705
KXB79762.1
Hypothetical protein.
       0.705
KXB79763.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.702
KXB79757.1
Hypothetical protein; KEGG: cla:Cla_0033 0.0025 MoxR/RavA-like ATPase; K03924 MoxR-like ATPase; Psort location: Cytoplasmic, score: 8.96.
       0.701
KXB75114.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
   
 
 0.689
KXB75113.1
Putative phage DNA packaging protein.
  
 
 0.688
KXB79756.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.575
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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