STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB79702.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (396 aa)    
Predicted Functional Partners:
KXB79701.1
DNA binding domain, excisionase family.
 
     0.931
KXB79703.1
Hypothetical protein; KEGG: lpl:lp_1963 0.0018 dnaG; DNA primase DnaG; K02316 DNA primase; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.880
KXB77291.1
CHC2 zinc finger domain protein; KEGG: liv:LIV_1412 4.8e-09 dnaG; putative DNA primase; K02316 DNA primase; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.779
KXB75812.1
Hypothetical protein; KEGG: eel:EUBELI_00676 6.0e-05 DNA primase; K02316 DNA primase; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.765
KXB78188.1
Hypothetical protein; KEGG: cow:Calow_0581 0.00028 DNA primase; K02316 DNA primase; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.763
KXB77846.1
Hypothetical protein; KEGG: brm:Bmur_2137 2.3e-05 DNA primase; K02316 DNA primase; Psort location: CytoplasmicMembrane, score: 9.82.
 
  
 0.762
KXB76316.1
Hypothetical protein; KEGG: ckn:Calkro_1918 3.8e-06 DNA primase; K02316 DNA primase; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.758
KXB78898.1
CHC2 zinc finger domain protein; KEGG: bfa:Bfae_16970 9.0e-09 DNA primase; K02316 DNA primase; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.754
KXB77116.1
Relaxase/mobilization nuclease domain protein; KEGG: tin:Tint_2201 8.6e-09 DNA topoisomerase; Psort location: Cytoplasmic, score: 8.96.
 
     0.641
KXB78896.1
Relaxase/mobilization nuclease domain protein; KEGG: tin:Tint_2201 2.5e-20 DNA topoisomerase; Psort location: Cytoplasmic, score: 8.96.
 
     0.614
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.