STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB79712.1Site-specific recombinase, phage integrase family; KEGG: pfe:PSF113_1062 4.4e-10 xerD; XerD protein K04763; Psort location: Cytoplasmic, score: 8.96; Belongs to the 'phage' integrase family. (407 aa)    
Predicted Functional Partners:
KXB79713.1
Hypothetical protein.
       0.773
KXB79701.1
DNA binding domain, excisionase family.
  
     0.724
KXB81590.1
KEGG: tvo:TVN1212 0.0072 hypothetical protein; K07151 dolichyl-diphosphooligosaccharide--protein glycosyltransferase; Psort location: OuterMembrane, score: 9.49.
  
     0.590
KXB79711.1
DNA-binding helix-turn-helix protein; KEGG: cly:Celly_2903 1.7e-05 phage repressor like transcriptional regulator, XRE family; K01356 repressor LexA.
       0.554
KXB79708.1
Hypothetical protein; KEGG: nth:Nther_0809 3.3e-09 LexA repressor; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.495
KXB78030.1
Pyruvate synthase; KEGG: pdn:HMPREF9137_1524 0. nifJ; pyruvate synthase K03737; Psort location: Cytoplasmic, score: 8.96.
    
  0.465
KXB79115.1
Hypothetical protein.
  
     0.455
KXB79114.1
Hypothetical protein.
  
     0.408
KXB79709.1
KEGG: cbb:CLD_3123 0.00018 hypothetical protein; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA; Psort location: Cytoplasmic, score: 8.96.
       0.406
KXB79710.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.406
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.