Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
KXB79570.1KEGG: pmz:HMPREF0659_A6045 9.9e-122 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminal domain protein K00057; Psort location: Cytoplasmic, score: 9.26. (351 aa)    
Predicted Functional Partners:
KXB74240.1
KEGG: pdn:HMPREF9137_0396 9.3e-213 glpA; glycerol-3-phosphate dehydrogenase K00111; Psort location: Cytoplasmic, score: 9.12; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 0.901
pgi
Glucose-6-phosphate isomerase; KEGG: pmz:HMPREF0659_A6044 7.1e-215 pgi; glucose-6-phosphate isomerase K01810; Psort location: Cytoplasmic, score: 9.97; Belongs to the GPI family.
 
  
 0.880
der
Ribosome biogenesis GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
 
  
 0.858
KXB79151.1
Acyltransferase; KEGG: pdn:HMPREF9137_1552 2.7e-103 acyltransferase; K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
    
 0.850
KXB74238.1
KEGG: pdn:HMPREF9137_0394 1.1e-184 glpC; glycerol-3-phosphate dehydrogenase K00113; Psort location: CytoplasmicMembrane, score: 7.88.
    
  0.841
KXB74239.1
KEGG: pdn:HMPREF9137_0395 3.2e-109 glpB; glycerol-3-phosphate dehydrogenase K00112; Psort location: CytoplasmicMembrane, score: 7.88.
     
  0.841
lysS
lysine--tRNA ligase; KEGG: pmz:HMPREF0659_A6046 3.4e-286 lysS; lysine--tRNA ligase K04567; Psort location: Cytoplasmic, score: 10.00; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.811
KXB79572.1
HAD hydrolase, family IA, variant 3; KEGG: mez:Mtc_0829 7.6e-28 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED.
  
 
 0.741
KXB77714.1
KEGG: pmz:HMPREF0659_A5518 3.5e-62 pyrazinamidase/nicotinamidase family protein; K08281 nicotinamidase/pyrazinamidase; Psort location: Cytoplasmic, score: 9.97.
  
   0.683
KXB78009.1
KEGG: pit:PIN17_A1294 9.4e-165 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134; Psort location: Cytoplasmic, score: 9.97.
    
 
 0.681
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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