STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB79580.1Hypothetical protein; KEGG: ebe:B21_03481 1.7e-06 insI-1; IS30 transposase, N-ter fragment. (85 aa)    
Predicted Functional Partners:
KXB77249.1
Hypothetical protein; KEGG: ebe:B21_03481 1.6e-05 insI-1; IS30 transposase, N-ter fragment.
 
     0.868
KXB76620.1
Hypothetical protein; KEGG: ebe:B21_03481 0.0050 insI-1; IS30 transposase, N-ter fragment.
  
     0.761
KXB79581.1
Hypothetical protein.
       0.655
KXB79579.1
CorA-like protein.
       0.432
KXB79582.1
Hypothetical protein; KEGG: ase:ACPL_2243 0.0090 Modification methylase BabI; Psort location: Cytoplasmic, score: 8.96.
       0.406
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.