STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB79583.1Hypothetical protein; KEGG: hcm:HCD_04450 2.4e-72 putative site-specific DNA-methyltransferase; K00558 DNA (cytosine-5-)-methyltransferase; Psort location: Cytoplasmic, score: 8.96. (367 aa)    
Predicted Functional Partners:
KXB79584.1
Putative modification methylase HpaII; KEGG: cyt:cce_4511 2.4e-102 putative site-specific DNA-methyltransferase; K00558 DNA (cytosine-5-)-methyltransferase; Psort location: Cytoplasmic, score: 8.96.
  
  0.987
KXB77617.1
P-loop domain protein, KAP family; KEGG: cbk:CLL_A3035 0.00012 endopeptidase O; K07386 putative endopeptidase; Psort location: Cytoplasmic, score: 8.96.
 
     0.770
KXB78743.1
OmpA family protein; Psort location: OuterMembrane, score: 9.93.
  
     0.749
KXB74713.1
KEGG: mif:Metin_1378 1.8e-10 protein serine/threonine phosphatase; K01090 protein phosphatase; Psort location: Cytoplasmic, score: 8.96.
  
     0.739
KXB74711.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.734
KXB77397.1
Hypothetical protein; KEGG: efc:EFAU004_01897 0.00078 IS1380 family transposase; Psort location: Cytoplasmic, score: 8.96.
  
     0.720
KXB75442.1
Transposase, IS4 family; KEGG: efc:EFAU004_01897 0.0036 IS1380 family transposase; Psort location: Cytoplasmic, score: 8.96.
  
     0.708
KXB76507.1
KEGG: efu:HMPREF0351_12109 2.7e-05 TetR/AcrR family transcriptional regulator.
  
    0.691
KXB77794.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.661
KXB79582.1
Hypothetical protein; KEGG: ase:ACPL_2243 0.0090 Modification methylase BabI; Psort location: Cytoplasmic, score: 8.96.
       0.660
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.