STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB79597.1Acetyltransferase, GNAT family; KEGG: pit:PIN17_A1535 1.0e-48 FR47-like protein; K00657 diamine N-acetyltransferase; Psort location: Cytoplasmic, score: 9.97. (179 aa)    
Predicted Functional Partners:
KXB78030.1
Pyruvate synthase; KEGG: pdn:HMPREF9137_1524 0. nifJ; pyruvate synthase K03737; Psort location: Cytoplasmic, score: 8.96.
    
 0.899
KXB79596.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.821
recR
Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
  
    0.818
KXB79594.1
Hypothetical protein.
       0.782
rnc
Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
   
    0.643
KXB78996.1
Hydrolase, carbon-nitrogen family; KEGG: pit:PIN17_A1639 1.1e-127 putative N-carbamoylputrescine amidase; K12251 N-carbamoylputrescine amidase; Psort location: Cytoplasmic, score: 9.97.
    
  0.637
KXB79166.1
KEGG: pdn:HMPREF9137_1471 1.2e-157 putative 3-deoxy-7-phosphoheptulonate synthase; K04516 chorismate mutase; Psort location: Cytoplasmic, score: 9.97.
    
  0.608
KXB78563.1
Hypothetical protein.
 
     0.551
KXB77772.1
KEGG: pdn:HMPREF9137_0543 0. 2-oxoacid:acceptor oxidoreductase subunit alpha; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Psort location: Cytoplasmic, score: 8.96.
    
  0.547
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
   
 
 0.538
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.