STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB79601.1BNR/Asp-box repeat protein; KEGG: bth:BT_0455 1.4e-184 sialidase; K01186 sialidase-1; Psort location: Periplasmic, score: 9.44. (561 aa)    
Predicted Functional Partners:
KXB79602.1
Glycosyl hydrolase family 20, catalytic domain protein; KEGG: pmz:HMPREF0659_A6443 1.7e-206 beta-L-N-acetylhexosaminidase family protein; K12373 hexosaminidase; Psort location: Periplasmic, score: 9.76.
 
 
 0.934
KXB79598.1
Hypothetical protein.
 
     0.807
KXB79599.1
Mucin-desulfating sulfatase; KEGG: pdn:HMPREF9137_2290 8.9e-121 mdsC; mucin-desulfating sulfatase; Psort location: Cytoplasmic, score: 8.96.
 
    0.750
KXB79600.1
Putative alpha-1,2-mannosidase; KEGG: xca:xccb100_1258 7.7e-154 alpha-mannosidase.
 
     0.655
KXB74152.1
Hyaluronoglucosaminidase; KEGG: cpe:CPE1279 6.4e-57 nagK; hyaluronidase; K01197 hyaluronoglucosaminidase.
 
 0.645
KXB78466.1
Glycosyl hydrolase family 20, catalytic domain protein; KEGG: pru:PRU_1156 3.0e-168 family 20 glycosyl hydrolase; K12373 hexosaminidase; Psort location: Periplasmic, score: 9.76.
 
 
 0.596
KXB76012.1
Helicase protein; KEGG: atm:ANT_21200 3.0e-67 putative ATP-dependent helicase; Psort location: Cytoplasmic, score: 8.96.
   
    0.569
KXB74643.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
   
    0.569
KXB78468.1
Hypothetical protein; KEGG: pmz:HMPREF0659_A6969 9.2e-174 F5/8 type C domain protein; K01206 alpha-L-fucosidase.
 
   
 0.558
KXB79603.1
KEGG: fin:KQS_04245 8.0e-88 putative hybrid glycoside hydrolase, group 92(-20) family protein precursor.
 
     0.531
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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