STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB79620.1Flavoprotein family protein; KEGG: bao:BAMF_2804 2.6e-43 ytfP; NAD(FAD) dehydrogenase K07007; Psort location: Cytoplasmic, score: 9.97. (413 aa)    
Predicted Functional Partners:
KXB79617.1
Deoxynucleoside kinase; KEGG: pdn:HMPREF9137_1216 3.3e-91 deoxynucleoside kinase; Psort location: Cytoplasmic, score: 8.96.
  
    0.674
KXB79618.1
Type I phosphodiesterase / nucleotide pyrophosphatase; KEGG: fba:FIC_02089 3.6e-92 alkaline phosphatase.
       0.671
KXB79619.1
Putative manganese transport protein MntH; KEGG: bqy:MUS_0397 1.9e-12 ycsG; argininosuccinate synthase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.671
KXB79616.1
Deoxynucleoside kinase; KEGG: pdn:HMPREF9137_1215 9.8e-99 dck; deoxyadenosine/deoxycytidine kinase; Psort location: Cytoplasmic, score: 8.96.
  
    0.589
glyA
Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
       0.501
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.