Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB79114.1Hypothetical protein. (251 aa)    
Predicted Functional Partners:
KXB79115.1
Hypothetical protein.
 
    0.947
KXB74390.1
KEGG: cyb:CYB_1515 0.0010 TPR repeat-containing protein kinase; K08884 serine/threonine protein kinase, bacterial.
  
     0.706
KXB80151.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
  
     0.530
KXB74159.1
Phosphate-selective porin O and P.
  
     0.523
KXB79952.1
Hypothetical protein.
  
     0.520
KXB75686.1
Hypothetical protein.
  
     0.511
KXB74174.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.474
KXB79092.1
Hypothetical protein.
  
     0.454
KXB81368.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.52.
  
     0.425
KXB79712.1
Site-specific recombinase, phage integrase family; KEGG: pfe:PSF113_1062 4.4e-10 xerD; XerD protein K04763; Psort location: Cytoplasmic, score: 8.96; Belongs to the 'phage' integrase family.
  
     0.408
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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