STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB79121.1SPFH/Band 7/PHB domain protein; KEGG: reh:H16_A2036 1.1e-53 h16_A2036; membrane protease subunits, stomatin/prohibitin homologs; Psort location: Cytoplasmic, score: 8.96. (333 aa)    
Predicted Functional Partners:
ftsH
ATP-dependent metallopeptidase HflB; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.990
KXB79120.1
Nodulation efficiency protein D; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.972
KXB78257.1
Peptidase, S54 family; KEGG: pmz:HMPREF0659_A6317 6.3e-120 peptidase, S54 family; Psort location: CytoplasmicMembrane, score: 10.00.
   
 0.945
KXB78156.1
Hypothetical protein; KEGG: apb:SAR116_1299 5.3e-107 endonuclease.
   
 0.919
KXB78018.1
Respiratory-chain NADH dehydrogenase, subunit; KEGG: pdn:HMPREF9137_1116 8.1e-246 hypothetical protein; K13378 NADH-quinone oxidoreductase subunit C/D; Psort location: Cytoplasmic, score: 9.12.
   
 
 0.806
KXB79122.1
KEGG: pmz:HMPREF0659_A5505 2.8e-124 UDP-N-acetylglucosamine 2-epimerase K01791; Psort location: Cytoplasmic, score: 9.97.
       0.724
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
 0.647
KXB76225.1
KEGG: pmz:HMPREF0659_A6520 0. peptidase M16 inactive domain protein; Belongs to the peptidase M16 family.
  
 0.634
KXB81360.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.52.
  
 0.633
KXB82145.1
Peptidase M16 inactive domain protein; KEGG: pit:PIN17_A1231 0. peptidase, M16 family K07263; Psort location: Cytoplasmic, score: 8.96.
  
 0.629
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.