STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB79133.1Peptidase, M24 family; KEGG: pdn:HMPREF9137_1440 2.9e-209 peptidase, M24 family K01262; Psort location: Cytoplasmic, score: 9.97. (468 aa)    
Predicted Functional Partners:
KXB79134.1
KEGG: pru:PRU_0556 3.4e-160 C1 family peptidase; Belongs to the peptidase C1 family.
 
   
 0.769
KXB79132.1
Phospholipase, patatin family; KEGG: bce:BC0759 8.6e-52 Serine protease; Psort location: Cytoplasmic, score: 8.96.
 
   
 0.751
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
   
   0.721
KXB78030.1
Pyruvate synthase; KEGG: pdn:HMPREF9137_1524 0. nifJ; pyruvate synthase K03737; Psort location: Cytoplasmic, score: 8.96.
     
 0.632
KXB79136.1
KEGG: pmz:HMPREF0659_A5961 1.6e-242 ATP-dependent DNA helicase, RecQ family K03654; Psort location: Cytoplasmic, score: 9.97.
  
    0.581
pepT
Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.
  
 
 0.560
KXB80837.1
Xaa-His dipeptidase; KEGG: pdn:HMPREF9137_0071 3.8e-200 pepD_1; Xaa-His dipeptidase; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.560
KXB79573.1
Xaa-His dipeptidase; KEGG: pdn:HMPREF9137_1691 2.8e-195 pepD_2; Xaa-His dipeptidase; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.560
KXB82132.1
Peptidase family M13; KEGG: pmz:HMPREF0659_A6591 3.6e-282 peptidase family M13 K07386.
   
 
 0.558
ileS
isoleucine--tRNA ligase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily.
  
 
 0.512
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.