Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB79138.1Hypothetical protein; Psort location: OuterMembrane, score: 9.49. (378 aa)    
Predicted Functional Partners:
KXB81961.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.765
KXB80088.1
OmpA family protein; KEGG: hhy:Halhy_4875 0.00037 OmpA/MotB domain-containing protein; K02275 cytochrome c oxidase subunit II; Psort location: OuterMembrane, score: 10.00.
  
     0.761
KXB74121.1
Hypothetical protein.
  
     0.758
KXB74268.1
Gliding motility-associated lipoprotein GldH.
  
     0.758
KXB74998.1
Hypothetical protein.
  
     0.757
KXB78747.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.745
KXB74186.1
Hypothetical protein.
  
     0.741
KXB79137.1
Oxidoreductase, NAD-binding domain protein; KEGG: zga:zobellia_1339 9.1e-64 NAD(P)-dependent oxidoreductase; Psort location: Periplasmic, score: 9.44.
 
     0.739
KXB74212.1
Hypothetical protein.
  
     0.734
KXB75710.1
Hypothetical protein.
  
     0.732
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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