STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB79140.1Nitroreductase family protein; KEGG: bfr:BF3826 5.7e-78 oxidoreductase; K00540; Belongs to the flavin oxidoreductase frp family. (272 aa)    
Predicted Functional Partners:
KXB79141.1
Putative ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.
     
 0.729
KXB78445.1
O-succinylbenzoic acid--CoA ligase family protein; KEGG: pit:PIN17_A1102 4.2e-107 AMP-binding enzyme domain protein; K01911 O-succinylbenzoic acid--CoA ligase; Psort location: Cytoplasmic, score: 8.96.
   
 
 0.690
KXB78099.1
AMP-binding enzyme; KEGG: gct:GC56T3_2026 3.3e-33 AMP-dependent synthetase and ligase; K12508 feruloyl-CoA synthase; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.690
KXB79169.1
KEGG: pmz:HMPREF0659_A7207 5.4e-82 ribF; riboflavin biosynthesis protein RibF K11753; Psort location: Cytoplasmic, score: 9.97.
    
 0.664
KXB81585.1
YcaO-like family protein; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.621
KXB79143.1
KEGG: pdn:HMPREF9137_2497 1.4e-140 N-acetylmuramoyl-L-alanine amidase K01448.
  
    0.613
KXB79142.1
Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
       0.611
ribBA
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
   
 
 0.611
KXB79144.1
Hypothetical protein.
       0.592
KXB79955.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.545
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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