Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB79154.1Hypothetical protein; KEGG: zga:zobellia_4408 0.0034 thiol-disulfide oxidoreductase. (282 aa)    
Predicted Functional Partners:
KXB74186.1
Hypothetical protein.
  
     0.773
KXB76234.1
Hypothetical protein.
  
     0.771
KXB74998.1
Hypothetical protein.
  
     0.771
KXB74321.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.770
KXB80092.1
Hypothetical protein; KEGG: pkn:PKH_011660 0.0030 mannose-6-phosphate isomerase.
  
     0.767
KXB78066.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.765
KXB78964.1
BNR/Asp-box repeat protein.
  
     0.762
KXB74319.1
Hypothetical protein; KEGG: sgn:SGRA_3959 0.00020 glycosyl transferase family protein; Psort location: Periplasmic, score: 9.84.
  
    0.760
KXB74192.1
Sporulation and cell division repeat protein.
  
     0.758
KXB76236.1
KEGG: pdn:HMPREF9137_0447 2.7e-110 AhpC/TSA family antioxidant; Psort location: Cytoplasmic, score: 8.96.
  
     0.756
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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