STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB79161.1Tetratricopeptide repeat protein. (59 aa)    
Predicted Functional Partners:
ffh
Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.
    
  0.861
KXB79159.1
KEGG: pmz:HMPREF0659_A5966 4.4e-167 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin) K00174; Psort location: Cytoplasmic, score: 8.96.
       0.840
KXB79160.1
KEGG: pmz:HMPREF0659_A5967 7.2e-32 4Fe-4S binding domain protein; K00176 2-oxoglutarate ferredoxin oxidoreductase subunit delta.
       0.840
KXB79158.1
Thiamine pyrophosphate enzyme, TPP binding domain protein; KEGG: pdn:HMPREF9137_1431 1.5e-118 thiamine pyrophosphate protein; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta.
       0.839
folD
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
       0.827
KXB79157.1
KEGG: pmz:HMPREF0659_A5964 1.0e-78 2-oxoacid:ferredoxin/flavodoxin oxidoreductase, gamma subunit; K00177 2-oxoglutarate ferredoxin oxidoreductase subunit gamma.
       0.708
KXB78292.1
Tetratricopeptide repeat protein; KEGG: apb:SAR116_1534 1.5e-05 hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
  0.596
ribBA
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.567
KXB74595.1
Hypothetical protein.
   
  0.519
KXB78436.1
Putative serine protease MucD; KEGG: pdn:HMPREF9137_1111 7.3e-213 peptidase Do; Psort location: Periplasmic, score: 10.00.
    
  0.440
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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