STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB79085.1KEGG: pit:PIN17_A1593 6.0e-99 glycerate kinase K00865; Psort location: Cytoplasmic, score: 9.26; Belongs to the glycerate kinase type-1 family. (373 aa)    
Predicted Functional Partners:
KXB74290.1
KEGG: pmz:HMPREF0659_A7303 5.5e-112 putative glycerate dehydrogenase; K00018 glycerate dehydrogenase; Psort location: Cytoplasmic, score: 9.97; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
  
 0.759
tadA
Cytidine and deoxycytidylate deaminase zinc-binding region; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
 
 
    0.699
gpmI
2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
     
 0.669
KXB79086.1
KEGG: zga:zobellia_4075 1.9e-63 metallo-beta-lactamase superfamily protein K06167; Psort location: Cytoplasmic, score: 9.97.
       0.614
murB
UDP-N-acetylmuramate dehydrogenase; Cell wall formation.
       0.541
KXB79088.1
Hypothetical protein.
       0.476
KXB79502.1
KEGG: pdn:HMPREF9137_2491 1.3e-50 phosphoglycerate mutase family protein; K15634 probable phosphoglycerate mutase.
     
 0.423
KXB74324.1
D-phosphoglycerate dehydrogenase; KEGG: pit:PIN17_A1251 6.5e-125 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain protein; K00058 D-3-phosphoglycerate dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
    
  0.414
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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