STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB79086.1KEGG: zga:zobellia_4075 1.9e-63 metallo-beta-lactamase superfamily protein K06167; Psort location: Cytoplasmic, score: 9.97. (257 aa)    
Predicted Functional Partners:
murB
UDP-N-acetylmuramate dehydrogenase; Cell wall formation.
       0.789
KXB79088.1
Hypothetical protein.
       0.739
KXB79169.1
KEGG: pmz:HMPREF0659_A7207 5.4e-82 ribF; riboflavin biosynthesis protein RibF K11753; Psort location: Cytoplasmic, score: 9.97.
      0.639
KXB79085.1
KEGG: pit:PIN17_A1593 6.0e-99 glycerate kinase K00865; Psort location: Cytoplasmic, score: 9.26; Belongs to the glycerate kinase type-1 family.
       0.614
pheS
KEGG: pmz:HMPREF0659_A6527 4.1e-164 pheS; phenylalanine--tRNA ligase, alpha subunit K01889; Psort location: Cytoplasmic, score: 10.00; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.
       0.405
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.