STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB79100.1Hypothetical protein. (96 aa)    
Predicted Functional Partners:
recF
Putative DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.
  
  
 0.875
ribH
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.
       0.696
KXB79102.1
Tetratricopeptide repeat protein; KEGG: ava:Ava_1552 0.0016 TPR repeat-containing serine/threonine protein kinase K00908.
       0.693
KXB77443.1
Hypothetical protein; KEGG: ccm:Ccan_20960 0.0070 S-adenosyl-methyltransferase MraW; Psort location: Cytoplasmic, score: 8.96.
  
     0.631
KXB74998.1
Hypothetical protein.
  
     0.623
KXB79106.1
Hypothetical protein; KEGG: pgt:PGTDC60_1437 2.0e-13 putative dipeptidyl-peptidase III; K01277 dipeptidyl-peptidase III.
 
     0.561
KXB80092.1
Hypothetical protein; KEGG: pkn:PKH_011660 0.0030 mannose-6-phosphate isomerase.
  
     0.546
KXB78225.1
Hypothetical protein.
  
     0.518
KXB80389.1
Hypothetical protein.
  
     0.513
KXB80397.1
Hypothetical protein; KEGG: fsi:Flexsi_0864 0.0028 diacylglycerol kinase; K00901 diacylglycerol kinase; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.510
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.