Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KXB79102.1Tetratricopeptide repeat protein; KEGG: ava:Ava_1552 0.0016 TPR repeat-containing serine/threonine protein kinase K00908. (224 aa)    
Predicted Functional Partners:
KXB79959.1
Hypothetical protein; KEGG: pdn:HMPREF9137_0079 1.2e-299 hypothetical protein; K03770 peptidyl-prolyl cis-trans isomerase D; Psort location: OuterMembrane, score: 9.49.
 
 
   0.909
ribH
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.
  
    0.829
KXB75734.1
OstA-like protein.
  
    0.721
KXB78292.1
Tetratricopeptide repeat protein; KEGG: apb:SAR116_1534 1.5e-05 hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.709
KXB79956.1
Outer membrane insertion signal domain protein; Psort location: OuterMembrane, score: 9.52.
  
     0.705
KXB75732.1
KEGG: pmz:HMPREF0659_A6174 3.4e-48 PPIC-type PPIASE domain protein; K03770 peptidyl-prolyl cis-trans isomerase D.
 
 
   0.681
KXB75733.1
KEGG: pdn:HMPREF9137_0249 3.3e-194 PPIC-type PPIASE domain-containing protein; K03771 peptidyl-prolyl cis-trans isomerase SurA.
 
 
   0.680
KXB79622.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
 
   
 0.668
KXB80387.1
Hypothetical protein.
  
     0.667
KXB77451.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
   
 0.660
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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