Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
KXB79105.1Peptidase family M49; KEGG: pmz:HMPREF0659_A6864 7.1e-238 peptidase, M49 family; K01277 dipeptidyl-peptidase III; Psort location: Cytoplasmic, score: 8.96. (658 aa)    
Predicted Functional Partners:
KXB80838.1
Hsp90 protein; KEGG: eab:ECABU_c05560 3.7e-67 htpG; heat shock protein HtpG K04079; Psort location: Cytoplasmic, score: 9.97.
   
 0.880
alaS
alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
 0.878
KXB79106.1
Hypothetical protein; KEGG: pgt:PGTDC60_1437 2.0e-13 putative dipeptidyl-peptidase III; K01277 dipeptidyl-peptidase III.
 
     0.870
KXB79104.1
Transcriptional regulator, AraC family; KEGG: taz:TREAZ_3431 1.2e-06 methylphosphotriester-DNA alkyltransferase K13530.
       0.820
KXB78129.1
Hypothetical protein; KEGG: pit:PIN17_A1496 7.1e-96 glycosyltransferase, group 2 family protein; Psort location: CytoplasmicMembrane, score: 9.46.
 
 
 0.787
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.748
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.734
KXB78038.1
Galactokinase; KEGG: pmz:HMPREF0659_A6474 6.6e-180 galK; galactokinase K00849; Psort location: Cytoplasmic, score: 8.96; Belongs to the GHMP kinase family. GalK subfamily.
   
 0.732
KXB80146.1
Hypothetical protein.
 
 
  0.705
KXB74994.1
KEGG: pdn:HMPREF9137_1209 0. glycosyltransferase group 2 family protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.685
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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