Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
KXB78993.1TonB-dependent receptor. (261 aa)    
Predicted Functional Partners:
KXB79974.1
Hypothetical protein.
 
 
 0.869
KXB79973.1
Hypothetical protein; KEGG: pfe:PSF113_4166 0.0090 exbD; protein ExbD/TolR K03559.
 
 
 0.868
KXB79971.1
Transporter, MotA/TolQ/ExbB proton channel family protein; KEGG: pfe:PSF113_4167 1.9e-11 exbB; protein ExbB/TolQ K03561; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.816
KXB80395.1
TonB-dependent receptor plug domain protein; Psort location: OuterMembrane, score: 9.49.
 
 0.790
KXB80135.1
Transporter, MotA/TolQ/ExbB proton channel family protein; KEGG: apb:SAR116_2296 1.7e-10 Biopolymer transport protein K03562; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.788
KXB80133.1
Hypothetical protein.
  
 
 0.787
KXB80134.1
Hypothetical protein.
  
 
 0.787
KXB79493.1
Hypothetical protein.
 
 0.724
KXB78281.1
TonB-dependent receptor plug domain protein; Psort location: OuterMembrane, score: 9.93.
 
 0.719
KXB78225.1
Hypothetical protein.
  
     0.708
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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