STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB79003.1Hypothetical protein. (391 aa)    
Predicted Functional Partners:
KXB79004.1
KEGG: btl:BALH_2510 0.00038 chb; chitin-binding protein K03933.
    
  0.865
KXB79005.1
Hypothetical protein.
       0.840
KXB78998.1
TonB-dependent receptor; Psort location: OuterMembrane, score: 9.49.
 
 
   0.818
KXB79002.1
Hypothetical protein.
       0.816
KXB79000.1
Hypothetical protein.
 
     0.802
KXB79001.1
Hypothetical protein.
       0.763
KXB78242.1
KEGG: pdn:HMPREF9137_0969 0. peptidase, S8/S53 family; Psort location: Extracellular, score: 9.72; Belongs to the peptidase S8 family.
  
 0.760
KXB78999.1
Hypothetical protein.
 
     0.691
KXB80596.1
Putative stage III sporulation protein E; KEGG: apb:SAR116_1808 5.5e-89 DNA segregation ATPase FtsK/SpoIIIE K03466; Psort location: CytoplasmicMembrane, score: 10.00.
    
 
 0.687
KXB75621.1
Hypothetical protein.
 
 0.622
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.