STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pckAPhosphoenolpyruvate carboxykinase; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. (540 aa)    
Predicted Functional Partners:
KXB78030.1
Pyruvate synthase; KEGG: pdn:HMPREF9137_1524 0. nifJ; pyruvate synthase K03737; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.959
KXB77455.1
KEGG: pdn:HMPREF9137_0880 1.7e-149 lactate/malate dehydrogenase, NAD binding domain-containing protein; K00024 malate dehydrogenase; Psort location: Cytoplasmic, score: 9.26; Belongs to the LDH/MDH superfamily.
  
 
 0.857
eno
Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
  
 
 0.857
KXB76224.1
Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
   
 
 0.854
KXB77462.1
Aspartate ammonia-lyase; KEGG: pdn:HMPREF9137_0739 9.2e-206 aspA; aspartate ammonia-lyase K01744; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.841
KXB77772.1
KEGG: pdn:HMPREF9137_0543 0. 2-oxoacid:acceptor oxidoreductase subunit alpha; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.737
KXB79506.1
Pyruvate kinase; KEGG: pdn:HMPREF9137_0096 1.9e-189 pyk; pyruvate kinase K00873; Psort location: Cytoplasmic, score: 9.97.
    
 0.722
KXB77322.1
Glutamate dehydrogenase, NAD-specific; KEGG: pit:PIN17_A1094 9.6e-227 gdh; glutamate dehydrogenase K00262; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.715
KXB74236.1
HMGL-like protein; KEGG: pit:PIN17_A1140 2.5e-290 carboxylase domain protein; K01960 pyruvate carboxylase subunit B; Psort location: Cytoplasmic, score: 9.97.
    
 0.715
KXB80136.1
KEGG: pmz:HMPREF0659_A5403 7.4e-149 putative aspartate transaminase; K00812 aspartate aminotransferase; Psort location: Cytoplasmic, score: 9.26.
    
 0.688
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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