STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB78956.1KEGG: pmz:HMPREF0659_A6360 5.0e-63 putative cytidine deaminase; K01489 cytidine deaminase. (159 aa)    
Predicted Functional Partners:
KXB74996.1
KEGG: pmz:HMPREF0659_A6645 3.1e-125 phosphorylase family protein; K00757 uridine phosphorylase; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.939
tdk
Thymidine kinase; KEGG: pit:PIN17_A1240 7.7e-83 tdk; thymidine kinase K00857; Psort location: Cytoplasmic, score: 9.97.
    
 0.851
udk
Uridine kinase; KEGG: pmz:HMPREF0659_A7128 5.0e-95 udk; uridine kinase K00876; Psort location: Cytoplasmic, score: 9.97.
    
 0.836
KXB79616.1
Deoxynucleoside kinase; KEGG: pdn:HMPREF9137_1215 9.8e-99 dck; deoxyadenosine/deoxycytidine kinase; Psort location: Cytoplasmic, score: 8.96.
    
 0.827
KXB79617.1
Deoxynucleoside kinase; KEGG: pdn:HMPREF9137_1216 3.3e-91 deoxynucleoside kinase; Psort location: Cytoplasmic, score: 8.96.
    
 0.827
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
  
    0.826
KXB81727.1
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate.
 
 
 0.821
KXB78957.1
KEGG: pmz:HMPREF0659_A6390 3.5e-78 glycosyltransferase, group 2 family protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.807
KXB80401.1
KEGG: pmz:HMPREF0659_A6356 1.2e-235 phosphoribulokinase/uridine kinase family protein; K00876 uridine kinase; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.740
KXB74170.1
KEGG: pmz:HMPREF0659_A5845 1.5e-93 purine nucleoside phosphorylase I, inosine and guanosine-specific K03783; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.728
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.