STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB78962.1Outer membrane protein assembly complex, YaeT protein; KEGG: apb:SAR116_0511 3.2e-18 surface antigen D15 K07277; Psort location: OuterMembrane, score: 10.00. (871 aa)    
Predicted Functional Partners:
KXB78961.1
Outer membrane protein; KEGG: hip:CGSHiEE_07435 4.4e-06 leuS; leucyl-tRNA synthetase K06142.
 
  
 0.950
KXB80145.1
Outer membrane assembly lipoprotein YfiO.
 
 
 0.933
KXB78964.1
BNR/Asp-box repeat protein.
  
 
 0.916
KXB78960.1
Outer membrane protein; KEGG: hip:CGSHiEE_07435 8.3e-07 leuS; leucyl-tRNA synthetase K06142; Psort location: Periplasmic, score: 9.83.
 
  
 0.869
KXB78963.1
Di-trans,poly-cis-decaprenylcistransferase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
  
  
 0.841
KXB78959.1
Outer membrane protein.
 
  
 0.815
KXB75733.1
KEGG: pdn:HMPREF9137_0249 3.3e-194 PPIC-type PPIASE domain-containing protein; K03771 peptidyl-prolyl cis-trans isomerase SurA.
 
 
 0.768
KXB79960.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.764
KXB74153.1
Permease, YjgP/YjgQ family; KEGG: hiq:CGSHiGG_02270 0.0013 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K07091; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.737
KXB74160.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.733
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.