STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB78891.1Site-specific recombinase, phage integrase family; KEGG: apb:SAR116_1748 0.00031 phage integrase; Psort location: Cytoplasmic, score: 8.96; Belongs to the 'phage' integrase family. (442 aa)    
Predicted Functional Partners:
KXB78900.1
Hypothetical protein.
  
     0.774
KXB78892.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.771
KXB78899.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.748
KXB78893.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
       0.746
KXB78894.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.746
KXB79704.1
Plasmid recombination enzyme; KEGG: edi:EDI_175070 0.0013 myosin-2 heavy chain, non muscle K10352; Psort location: Cytoplasmic, score: 8.96.
  
     0.705
KXB79703.1
Hypothetical protein; KEGG: lpl:lp_1963 0.0018 dnaG; DNA primase DnaG; K02316 DNA primase; Psort location: Cytoplasmic, score: 8.96.
  
     0.558
KXB76316.1
Hypothetical protein; KEGG: ckn:Calkro_1918 3.8e-06 DNA primase; K02316 DNA primase; Psort location: Cytoplasmic, score: 8.96.
  
     0.554
KXB78188.1
Hypothetical protein; KEGG: cow:Calow_0581 0.00028 DNA primase; K02316 DNA primase; Psort location: Cytoplasmic, score: 8.96.
  
     0.550
KXB78187.1
Virulence-associated protein E; Psort location: Cytoplasmic, score: 8.96.
  
     0.548
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.