STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB78893.1Hypothetical protein; Psort location: OuterMembrane, score: 9.49. (395 aa)    
Predicted Functional Partners:
KXB78892.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.820
KXB78894.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.795
KXB78891.1
Site-specific recombinase, phage integrase family; KEGG: apb:SAR116_1748 0.00031 phage integrase; Psort location: Cytoplasmic, score: 8.96; Belongs to the 'phage' integrase family.
       0.746
KXB77271.1
Hypothetical protein.
   
 
 0.692
KXB76570.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
   
 
 0.692
KXB76529.1
TraG family protein; KEGG: mhe:MHC_05765 0.0049 tryptophanyl-tRNA synthetase; K01867 tryptophanyl-tRNA synthetase.
   
 
 0.692
KXB74838.1
TraG family protein; Psort location: CytoplasmicMembrane, score: 10.00.
   
 
 0.692
KXB75124.1
Putative phage terminase, large subunit; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.466
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.