STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB78905.1Toxin-antitoxin system, toxin component, Fic family; KEGG: pdn:HMPREF9137_0457 1.1e-26 purC_2; phosphoribosylaminoimidazole succinocarboxamide synthase; Psort location: Cytoplasmic, score: 8.96. (337 aa)    
Predicted Functional Partners:
KXB78904.1
Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
    0.775
KXB78902.1
KEGG: hpj:jhp0726 6.5e-86 hsdS_4; type I restriction enzyme (specificity subunit); K01154 type I restriction enzyme, S subunit; Psort location: Cytoplasmic, score: 8.96.
  
    0.722
KXB78901.1
KEGG: bhl:Bache_2554 4.3e-247 type I restriction-modification system, M subunit; K03427 type I restriction enzyme M protein.
  
    0.660
KXB78903.1
KEGG: hie:R2846_0421 2.0e-107 prrC; Anticodon nuclease; Psort location: Cytoplasmic, score: 8.96.
       0.599
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.