STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB78791.1Alpha-galactosidase; KEGG: bfs:BF1418 1.5e-70 alpha-galactosidase K07407. (516 aa)    
Predicted Functional Partners:
KXB78742.1
KEGG: pmz:HMPREF0659_A6062 0. beta galactosidase small chain; K01190 beta-galactosidase.
 
 
 0.877
KXB75718.1
Hypothetical protein; KEGG: bhl:Bache_2923 9.6e-266 alpha-L-fucosidase.
  
   
 0.737
KXB78035.1
Putative aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
 
  0.685
KXB74152.1
Hyaluronoglucosaminidase; KEGG: cpe:CPE1279 6.4e-57 nagK; hyaluronidase; K01197 hyaluronoglucosaminidase.
  
 
 0.655
KXB78468.1
Hypothetical protein; KEGG: pmz:HMPREF0659_A6969 9.2e-174 F5/8 type C domain protein; K01206 alpha-L-fucosidase.
 
  
 0.558
KXB79602.1
Glycosyl hydrolase family 20, catalytic domain protein; KEGG: pmz:HMPREF0659_A6443 1.7e-206 beta-L-N-acetylhexosaminidase family protein; K12373 hexosaminidase; Psort location: Periplasmic, score: 9.76.
  
  
 0.554
KXB78466.1
Glycosyl hydrolase family 20, catalytic domain protein; KEGG: pru:PRU_1156 3.0e-168 family 20 glycosyl hydrolase; K12373 hexosaminidase; Psort location: Periplasmic, score: 9.76.
  
  
 0.537
KXB78970.1
Alpha amylase, catalytic domain protein; KEGG: pit:PIN17_A0177 8.6e-123 alpha amylase; K01176 alpha-amylase; Psort location: Extracellular, score: 9.71.
 
 
 0.531
KXB78792.1
KEGG: pmz:HMPREF0659_A5654 1.5e-175 phospholipase D domain protein; Psort location: CytoplasmicMembrane, score: 7.88.
       0.504
KXB82130.1
Alpha amylase, catalytic domain protein; KEGG: psm:PSM_A1380 3.4e-105 glycosidase; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.437
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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